Protein ZmPHD35
ZmPHD35 is a protein in the PHD family.
Information
Coreg Name: ZmPHD35
Species: Maize
Coreg Family: PHD
Gene Name(Synonym): PHD35
Uniprot ID: B4F827

Protein ZmPHD35

ZmPHD35 is a protein in the PHD family.

Overview of domains present in v5 transcripts
PF00628PF12998
Zm00001eb057160_T002
Zm00001eb057160_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d034006DAPseq no logo sequence fimo position
Zm00001d034006DAPseq no logo sequence fimo position
Zm00001d034006ChIPseq no logo sequence fimo position
Zm00001d034006PChIPseq no logo sequence fimo position

Interactions where ZmPHD35 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmPHD35 is the target  
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There are 73 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb057160_T002 from maize genome v5

Amino Acid Sequence
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MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12998
PF00628
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Nucleotide Sequence
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CCCGTCGTCGCCGGTCGCTCGACAT...

GRMZM5G813111_T01 from maize genome v3


Related TFome: pUT3469

Amino Acid Sequence
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MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

Nucleotide Sequence
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AGAATATTATCCTTGCACATAACAT...

GRMZM5G813111_T02 from maize genome v3

Amino Acid Sequence
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MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

Nucleotide Sequence
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AGAATATTATCCTTGCACATAACAT...

GRMZM5G813111_T03 from maize genome v3

Amino Acid Sequence
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MVSLHVCGSYTRNEIQGEMVLPNVQESSVRGSPSRTKAIGENGTCWNDIQGVIVLLDMHDLHPEVVLCEELVAIWSLGVV
A

Nucleotide Sequence
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GAACCTACAGTCCTTCCTCCAGTTC...

Zm00001d034006_T001 from maize genome v4

Amino Acid Sequence
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MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

Nucleotide Sequence
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GGACTAATTTGGTGATCGGGGATCC...

Zm00001d034006_T002 from maize genome v4

Amino Acid Sequence
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MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGDDFFPISVFLMFAYLVLPQSPKKCNFKSCPSIMGQTKEQI
KYILGVSSHGYDRSNMDDDESERMKKDIEASQDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPD
EPTVLPPVPVVSRDEKRRFGFSTPQASKKFREREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISY
GDMIACDNENCGGGEWFHYTCVGLTPETRFKGKWFCPTCRNLQ

Nucleotide Sequence
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GGACTAATTTGGTGATCGGGGATCC...

Zm00001eb057160_T001 from maize genome v5

Amino Acid Sequence
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MAIARTGVYVDDYLEYSSTLAGDLQRILSTMRELDDRAHGIMGQTKEQIKYILGVSSHGYDRSNMDDDESERMKKDIEAS
QDNALNLCTEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPTVLPPVPVVSRDEKRRFGFSTPQASKKFR
EREWDRERGMDFDLMPPPGSSKKAGTSMDVDQTIDPNEPTYCICHQISYGDMIACDNENCGGGEWFHYTCVGLTPETRFK
GKWFCPTCRNLQ

Nucleotide Sequence
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TTCAAAATTGAATTGGAAGGGATTC...


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